Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.46□□□□□ -0.57
PdfS4R2K0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PdfS4R2K0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PdfS4R2K0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.46□□□□□ -0.57
PdfS4R2K0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdfS4R2K0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.46□□□□□ -0.57
PdfS4R2K0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PdfS4R2K0 Gm27357-201ENSMUST00000183754 135 ntBASIC11.46□□□□□ -0.57
PdfS4R2K0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.46□□□□□ -0.57
PdfS4R2K0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PdfS4R2K0 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.46□□□□□ -0.57
PdfS4R2K0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdfS4R2K0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdfS4R2K0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdfS4R2K0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
PdfS4R2K0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PdfS4R2K0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.46□□□□□ -0.57
PdfS4R2K0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdfS4R2K0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PdfS4R2K0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PdfS4R2K0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PdfS4R2K0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PdfS4R2K0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
PdfS4R2K0 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.46□□□□□ -0.58
PdfS4R2K0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
PdfS4R2K0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
PdfS4R2K0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PdfS4R2K0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.45□□□□□ -0.58
PdfS4R2K0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
PdfS4R2K0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PdfS4R2K0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
PdfS4R2K0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.45□□□□□ -0.58
PdfS4R2K0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
PdfS4R2K0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Gm9103-201ENSMUST00000119371 405 ntBASIC11.45□□□□□ -0.58
PdfS4R2K0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.45□□□□□ -0.58
PdfS4R2K0 Gm27742-201ENSMUST00000184667 60 ntBASIC11.45□□□□□ -0.58
PdfS4R2K0 Gm17807-201ENSMUST00000186869 298 ntBASIC11.45□□□□□ -0.58
PdfS4R2K0 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.45□□□□□ -0.58
PdfS4R2K0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
PdfS4R2K0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PdfS4R2K0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.45□□□□□ -0.58
PdfS4R2K0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
PdfS4R2K0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PdfS4R2K0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PdfS4R2K0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
PdfS4R2K0 Gm18669-201ENSMUST00000216049 778 ntBASIC11.44□□□□□ -0.58
PdfS4R2K0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
PdfS4R2K0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.44□□□□□ -0.58
PdfS4R2K0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.44□□□□□ -0.58
PdfS4R2K0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
PdfS4R2K0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.44□□□□□ -0.58
PdfS4R2K0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdfS4R2K0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.44□□□□□ -0.58
PdfS4R2K0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms