Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb2S4R1M3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb2S4R1M3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb2S4R1M3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
H2afb2S4R1M3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb2S4R1M3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms