Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cldn9Q9Z0S7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Gm27300-201ENSMUST00000184085 97 ntBASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Gm27335-201ENSMUST00000184758 97 ntBASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cldn9Q9Z0S7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Gm12350-201ENSMUST00000121208 462 ntBASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn9Q9Z0S7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Gm12008-201ENSMUST00000117791 755 ntBASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Gm2651-201ENSMUST00000203560 838 ntBASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn9Q9Z0S7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms