Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.59□□□□□ -0.55
CcsQ9WU84 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CcsQ9WU84 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CcsQ9WU84 Mir3081-201ENSMUST00000175305 84 ntBASIC11.59□□□□□ -0.55
CcsQ9WU84 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.59□□□□□ -0.55
CcsQ9WU84 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.59□□□□□ -0.55
CcsQ9WU84 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.59□□□□□ -0.55
CcsQ9WU84 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
CcsQ9WU84 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CcsQ9WU84 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CcsQ9WU84 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.59□□□□□ -0.55
CcsQ9WU84 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CcsQ9WU84 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcsQ9WU84 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.58□□□□□ -0.55
CcsQ9WU84 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.55
CcsQ9WU84 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.58□□□□□ -0.56
CcsQ9WU84 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CcsQ9WU84 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CcsQ9WU84 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CcsQ9WU84 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.58□□□□□ -0.56
CcsQ9WU84 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.58□□□□□ -0.56
CcsQ9WU84 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CcsQ9WU84 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcsQ9WU84 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.58□□□□□ -0.56
CcsQ9WU84 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.57□□□□□ -0.56
CcsQ9WU84 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Acot6-202ENSMUST00000222921 3622 ntBASIC11.57□□□□□ -0.56
CcsQ9WU84 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CcsQ9WU84 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Gm15794-201ENSMUST00000120182 631 ntBASIC11.57□□□□□ -0.56
CcsQ9WU84 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC11.57□□□□□ -0.56
CcsQ9WU84 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.57□□□□□ -0.56
CcsQ9WU84 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.57□□□□□ -0.56
CcsQ9WU84 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CcsQ9WU84 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
CcsQ9WU84 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcsQ9WU84 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcsQ9WU84 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CcsQ9WU84 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcsQ9WU84 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CcsQ9WU84 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CcsQ9WU84 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CcsQ9WU84 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CcsQ9WU84 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms