Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Gm11025-201ENSMUST00000140773 466 ntBASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Gm45612-201ENSMUST00000211320 160 ntBASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr2e3Q9QXZ7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr2e3Q9QXZ7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Gm15483-201ENSMUST00000120338 456 ntBASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr2e3Q9QXZ7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nr2e3Q9QXZ7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr2e3Q9QXZ7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr2e3Q9QXZ7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms