Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Gm42555-201ENSMUST00000199304 1039 ntBASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smco4Q9JIS3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Gm42545-201ENSMUST00000202755 922 ntBASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smco4Q9JIS3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smco4Q9JIS3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smco4Q9JIS3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms