Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ube4bQ9ES00 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube4bQ9ES00 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ube4bQ9ES00 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube4bQ9ES00 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube4bQ9ES00 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ube4bQ9ES00 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ube4bQ9ES00 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ube4bQ9ES00 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4bQ9ES00 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms