Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dap3Q9ER88 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dap3Q9ER88 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dap3Q9ER88 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dap3Q9ER88 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Dap3Q9ER88 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Dap3Q9ER88 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dap3Q9ER88 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dap3Q9ER88 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dap3Q9ER88 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Dap3Q9ER88 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dap3Q9ER88 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Dap3Q9ER88 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dap3Q9ER88 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Mir3081-201ENSMUST00000175305 84 ntBASIC13.7□□□□□ -0.22
Dap3Q9ER88 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.7□□□□□ -0.22
Dap3Q9ER88 Gm44454-201ENSMUST00000198541 138 ntBASIC13.7□□□□□ -0.22
Dap3Q9ER88 Gm9172-201ENSMUST00000212092 954 ntBASIC13.7□□□□□ -0.22
Dap3Q9ER88 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.7□□□□□ -0.22
Dap3Q9ER88 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dap3Q9ER88 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.69□□□□□ -0.22
Dap3Q9ER88 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.69□□□□□ -0.22
Dap3Q9ER88 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Gm27742-201ENSMUST00000184667 60 ntBASIC13.69□□□□□ -0.22
Dap3Q9ER88 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dap3Q9ER88 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.68□□□□□ -0.22
Dap3Q9ER88 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.68□□□□□ -0.22
Dap3Q9ER88 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Dap3Q9ER88 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.67□□□□□ -0.22
Dap3Q9ER88 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Dap3Q9ER88 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms