Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Gm2274-201ENSMUST00000184539 609 ntBASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmg20aQ9DC33 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm11336-201ENSMUST00000118168 334 ntBASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm13436-201ENSMUST00000120418 567 ntBASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm16061-201ENSMUST00000122167 857 ntBASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm37055-201ENSMUST00000191866 133 ntBASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm7367-201ENSMUST00000057611 492 ntBASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hmg20aQ9DC33 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hmg20aQ9DC33 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmg20aQ9DC33 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.6□□□□□ -0.23
Hmg20aQ9DC33 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hmg20aQ9DC33 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.6□□□□□ -0.23
Hmg20aQ9DC33 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmg20aQ9DC33 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmg20aQ9DC33 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms