Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.72■□□□□ 0.59
Chmp4bQ9D8B3 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chmp4bQ9D8B3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Chmp4bQ9D8B3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chmp4bQ9D8B3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4bQ9D8B3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Gm14140-201ENSMUST00000119999 995 ntBASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.68■□□□□ 0.58
Chmp4bQ9D8B3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms