Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc7Q9D541 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Ccdc7Q9D541 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.39■□□□□ 0.38
Ccdc7Q9D541 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc7Q9D541 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Gm13464-201ENSMUST00000119418 935 ntBASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc7Q9D541 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Gm27300-201ENSMUST00000184085 97 ntBASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Gm27335-201ENSMUST00000184758 97 ntBASIC17.38■□□□□ 0.37
Ccdc7Q9D541 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc7Q9D541 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Gm11452-201ENSMUST00000122376 690 ntBASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc7Q9D541 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms