Protein–RNA interactions for Protein: Q9D516

Ccdc130, Coiled-coil domain-containing protein 130, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc130Q9D516 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ccdc130Q9D516 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc130Q9D516 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc130Q9D516 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc130Q9D516 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc130Q9D516 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc130Q9D516 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Gm13418-201ENSMUST00000119097 944 ntBASIC14.98□□□□□ -0.01
Ccdc130Q9D516 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Gm27646-201ENSMUST00000183989 110 ntBASIC14.98□□□□□ -0.01
Ccdc130Q9D516 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.98□□□□□ -0.01
Ccdc130Q9D516 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.98□□□□□ -0.01
Ccdc130Q9D516 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc130Q9D516 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Gm6296-201ENSMUST00000222599 943 ntBASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc130Q9D516 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.96□□□□□ -0.01
Ccdc130Q9D516 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc130Q9D516 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc130Q9D516 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc130Q9D516 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.96□□□□□ -0.02
Ccdc130Q9D516 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Ccdc130Q9D516 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc130Q9D516 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Ccdc130Q9D516 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc130Q9D516 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.95□□□□□ -0.02
Ccdc130Q9D516 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc130Q9D516 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc130Q9D516 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc130Q9D516 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms