Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chaf1bQ9D0N7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chaf1bQ9D0N7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Chaf1bQ9D0N7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Chaf1bQ9D0N7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Gm10252-201ENSMUST00000209541 832 ntBASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1bQ9D0N7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Gm29518-201ENSMUST00000190858 372 ntBASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Gm44454-201ENSMUST00000198541 138 ntBASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Gm18622-201ENSMUST00000219361 595 ntBASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1bQ9D0N7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1bQ9D0N7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1bQ9D0N7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1bQ9D0N7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.99□□□□□ -0.17
Chaf1bQ9D0N7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1bQ9D0N7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms