Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim13Q9CYB0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim13Q9CYB0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trim13Q9CYB0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Trim13Q9CYB0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim13Q9CYB0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Rprl3-201ENSMUST00000157400 290 ntBASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim13Q9CYB0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms