Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.18■□□□□ 0.18
Ssr1Q9CY50 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.18■□□□□ 0.18
Ssr1Q9CY50 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Gm7977-201ENSMUST00000193787 748 ntBASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ssr1Q9CY50 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Gm15358-201ENSMUST00000119249 520 ntBASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ssr1Q9CY50 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Ank2-226ENSMUST00000189368 339 ntBASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.15■□□□□ 0.18
Ssr1Q9CY50 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms