Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.02■□□□□ -0
Retreg3Q9CQV4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.02■□□□□ -0
Retreg3Q9CQV4 Gm10175-201ENSMUST00000086013 645 ntBASIC15.02■□□□□ -0
Retreg3Q9CQV4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retreg3Q9CQV4 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.02■□□□□ -0
Retreg3Q9CQV4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retreg3Q9CQV4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Gm45657-201ENSMUST00000211318 1349 ntBASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.01□□□□□ -0.01
Retreg3Q9CQV4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15□□□□□ -0.01
Retreg3Q9CQV4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15□□□□□ -0.01
Retreg3Q9CQV4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Gm25509-201ENSMUST00000116985 106 ntBASIC15□□□□□ -0.01
Retreg3Q9CQV4 Gm4913-201ENSMUST00000117075 1290 ntBASIC15□□□□□ -0.01
Retreg3Q9CQV4 Gm9385-201ENSMUST00000117563 472 ntBASIC15□□□□□ -0.01
Retreg3Q9CQV4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15□□□□□ -0.01
Retreg3Q9CQV4 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retreg3Q9CQV4 Gm28923-201ENSMUST00000187755 322 ntBASIC15□□□□□ -0.01
Retreg3Q9CQV4 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC15□□□□□ -0.01
Retreg3Q9CQV4 AC174742.1-201ENSMUST00000218272 304 ntBASIC15□□□□□ -0.01
Retreg3Q9CQV4 AC125539.1-201ENSMUST00000227423 622 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms