Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Gm6089-201ENSMUST00000197666 938 ntBASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rer1Q9CQU3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Gm25990-201ENSMUST00000102440 86 ntBASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Birc2-201ENSMUST00000054878 378 ntBASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rer1Q9CQU3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Gm9103-201ENSMUST00000119371 405 ntBASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Gm27459-201ENSMUST00000184860 107 ntBASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Gm37153-201ENSMUST00000193637 231 ntBASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Gm34391-201ENSMUST00000203706 907 ntBASIC12.18□□□□□ -0.46
Rer1Q9CQU3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rer1Q9CQU3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rer1Q9CQU3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rer1Q9CQU3 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.17□□□□□ -0.46
Rer1Q9CQU3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rer1Q9CQU3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rer1Q9CQU3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rer1Q9CQU3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.17□□□□□ -0.46
Rer1Q9CQU3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms