Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Gm44357-201ENSMUST00000195897 142 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm19658-201ENSMUST00000196231 138 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm44367-201ENSMUST00000196836 138 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm44350-201ENSMUST00000197197 138 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm44390-201ENSMUST00000197533 144 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm44313-201ENSMUST00000198018 138 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm44486-201ENSMUST00000198508 138 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm44314-201ENSMUST00000199263 138 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm44394-201ENSMUST00000199558 138 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm44484-201ENSMUST00000199873 138 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm44466-201ENSMUST00000200264 138 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm44359-201ENSMUST00000200671 138 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nipsnap3bQ9CQE1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Ank2-226ENSMUST00000189368 339 ntBASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nipsnap3bQ9CQE1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nipsnap3bQ9CQE1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Nipsnap3bQ9CQE1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms