Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Gm8097-201ENSMUST00000117903 829 ntBASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Gm18669-201ENSMUST00000216049 778 ntBASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim8Q99PJ2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Gm27741-201ENSMUST00000185060 237 ntBASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim8Q99PJ2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trim8Q99PJ2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim8Q99PJ2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trim8Q99PJ2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim8Q99PJ2 Gm17971-201ENSMUST00000190239 806 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms