Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Gm7787-201ENSMUST00000216858 688 ntBASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp1b1Q99LU0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp1b1Q99LU0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Chmp1b1Q99LU0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp1b1Q99LU0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp1b1Q99LU0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Gm2651-201ENSMUST00000203560 838 ntBASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp1b1Q99LU0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Chmp1b1Q99LU0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chmp1b1Q99LU0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms