Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp11Q99K46 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp11Q99K46 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp11Q99K46 Efs-202ENSMUST00000227037 2540 ntBASIC15.7■□□□□ 0.1
Usp11Q99K46 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Usp11Q99K46 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp11Q99K46 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp11Q99K46 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp11Q99K46 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp11Q99K46 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp11Q99K46 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp11Q99K46 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp11Q99K46 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp11Q99K46 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp11Q99K46 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.69■□□□□ 0.1
Usp11Q99K46 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Gm14722-201ENSMUST00000118943 689 ntBASIC15.69■□□□□ 0.1
Usp11Q99K46 Gm11764-201ENSMUST00000120221 623 ntBASIC15.69■□□□□ 0.1
Usp11Q99K46 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.69■□□□□ 0.1
Usp11Q99K46 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.69■□□□□ 0.1
Usp11Q99K46 Gm44771-201ENSMUST00000206975 626 ntBASIC15.69■□□□□ 0.1
Usp11Q99K46 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.69■□□□□ 0.1
Usp11Q99K46 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.69■□□□□ 0.1
Usp11Q99K46 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp11Q99K46 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Usp11Q99K46 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp11Q99K46 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp11Q99K46 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.68■□□□□ 0.1
Usp11Q99K46 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp11Q99K46 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Usp11Q99K46 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.68■□□□□ 0.1
Usp11Q99K46 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp11Q99K46 Gm37153-201ENSMUST00000193637 231 ntBASIC15.68■□□□□ 0.1
Usp11Q99K46 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Usp11Q99K46 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp11Q99K46 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Usp11Q99K46 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.67■□□□□ 0.1
Usp11Q99K46 Gm13036-201ENSMUST00000117799 748 ntBASIC15.67■□□□□ 0.1
Usp11Q99K46 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.67■□□□□ 0.1
Usp11Q99K46 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Usp11Q99K46 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms