Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Gm5566-201ENSMUST00000116118 459 ntBASIC17.09■□□□□ 0.33
Rfc4Q99J62 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.09■□□□□ 0.33
Rfc4Q99J62 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfc4Q99J62 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Rfc4Q99J62 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfc4Q99J62 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rfc4Q99J62 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rfc4Q99J62 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfc4Q99J62 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfc4Q99J62 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfc4Q99J62 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rfc4Q99J62 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Rfc4Q99J62 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rfc4Q99J62 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.08■□□□□ 0.32
Rfc4Q99J62 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rfc4Q99J62 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Gm12490-201ENSMUST00000120255 560 ntBASIC17.07■□□□□ 0.32
Rfc4Q99J62 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Shd-206ENSMUST00000225145 998 ntBASIC17.07■□□□□ 0.32
Rfc4Q99J62 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.07■□□□□ 0.32
Rfc4Q99J62 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfc4Q99J62 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.06■□□□□ 0.32
Rfc4Q99J62 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rfc4Q99J62 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Rfc4Q99J62 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfc4Q99J62 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfc4Q99J62 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfc4Q99J62 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfc4Q99J62 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfc4Q99J62 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfc4Q99J62 Gm15321-201ENSMUST00000121290 288 ntBASIC17.06■□□□□ 0.32
Rfc4Q99J62 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms