Protein–RNA interactions for Protein: Q91ZW3

Smarca5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, mousemouse

Known RBP Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca5Q91ZW3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Gm27301-201ENSMUST00000184012 127 ntBASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smarca5Q91ZW3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Gm10154-201ENSMUST00000084445 354 ntBASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smarca5Q91ZW3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.24■□□□□ 0.51
Smarca5Q91ZW3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smarca5Q91ZW3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Gm15467-201ENSMUST00000120582 445 ntBASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Gm5264-201ENSMUST00000190584 848 ntBASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.22■□□□□ 0.51
Smarca5Q91ZW3 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms