Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha11Q91Y19 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha11Q91Y19 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Gm6973-201ENSMUST00000117080 721 ntBASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Gm18889-201ENSMUST00000174284 929 ntBASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Gm44335-201ENSMUST00000196879 141 ntBASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Gm44297-201ENSMUST00000198304 141 ntBASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Gm44346-201ENSMUST00000198851 141 ntBASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Gm18057-201ENSMUST00000208220 503 ntBASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha11Q91Y19 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdha11Q91Y19 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms