Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Gm4899-201ENSMUST00000178708 719 ntBASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdha8Q91Y12 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Gm12350-201ENSMUST00000121208 462 ntBASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.5□□□□□ -0.09
Pcdha8Q91Y12 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Gm18733-201ENSMUST00000173950 856 ntBASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha8Q91Y12 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms