Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Thap2-203ENSMUST00000218989 527 ntBASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 AC117797.1-201ENSMUST00000223977 695 ntBASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gm5867-201ENSMUST00000063197 592 ntBASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhb20Q91XZ9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Gm28438-201ENSMUST00000188299 345 ntBASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Gm2272-201ENSMUST00000194903 582 ntBASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Gm37466-201ENSMUST00000195692 652 ntBASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhb20Q91XZ9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Gm38325-201ENSMUST00000194507 1377 ntBASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdhb20Q91XZ9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Gm12507-201ENSMUST00000119155 415 ntBASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Gm11622-201ENSMUST00000120525 691 ntBASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Gm17968-201ENSMUST00000194902 784 ntBASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 AC154730.1-201ENSMUST00000227874 816 ntBASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb20Q91XZ9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb20Q91XZ9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms