Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdhga4Q91XY4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Mir3113-201ENSMUST00000175478 76 ntBASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Gm27300-201ENSMUST00000184085 97 ntBASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Gm27335-201ENSMUST00000184758 97 ntBASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Gm2756-201ENSMUST00000195851 400 ntBASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdhga4Q91XY4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhga4Q91XY4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhga4Q91XY4 Gm14494-201ENSMUST00000118786 435 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms