Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx41Q91VN6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx41Q91VN6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx41Q91VN6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx41Q91VN6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx41Q91VN6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Gm8396-201ENSMUST00000057361 823 ntBASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx41Q91VN6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Gm14701-201ENSMUST00000117156 348 ntBASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Gm12008-201ENSMUST00000117791 755 ntBASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Gm11025-201ENSMUST00000140773 466 ntBASIC17.07■□□□□ 0.32
Ddx41Q91VN6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.07■□□□□ 0.32
Ddx41Q91VN6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx41Q91VN6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Gm20553-201ENSMUST00000204205 844 ntBASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx41Q91VN6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Gm10499-201ENSMUST00000174094 934 ntBASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx41Q91VN6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms