Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.03■□□□□ -0
Rpa1Q8VEE4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.03■□□□□ -0
Rpa1Q8VEE4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Rpa1Q8VEE4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rpa1Q8VEE4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rpa1Q8VEE4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Gm9013-201ENSMUST00000132939 882 ntBASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpa1Q8VEE4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Gm45003-201ENSMUST00000205875 2158 ntBASIC15□□□□□ -0.01
Rpa1Q8VEE4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Gm13312-201ENSMUST00000119631 718 ntBASIC15□□□□□ -0.01
Rpa1Q8VEE4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Gm9172-201ENSMUST00000212092 954 ntBASIC15□□□□□ -0.01
Rpa1Q8VEE4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpa1Q8VEE4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms