Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.91□□□□□ -0.02
Vps39Q8R5L3 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Vps39Q8R5L3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Gm7862-201ENSMUST00000121461 292 ntBASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Vps39Q8R5L3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Gm7153-201ENSMUST00000117092 455 ntBASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.89□□□□□ -0.03
Vps39Q8R5L3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Gm12134-201ENSMUST00000122109 520 ntBASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Vps39Q8R5L3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms