Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atp2a1Q8R429 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 BC037039-201ENSMUST00000192003 2205 ntBASIC16.62■□□□□ 0.25
Atp2a1Q8R429 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atp2a1Q8R429 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Gm15483-201ENSMUST00000120338 456 ntBASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Gm20949-201ENSMUST00000206478 952 ntBASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atp2a1Q8R429 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.6■□□□□ 0.25
Atp2a1Q8R429 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Gm5779-201ENSMUST00000218467 910 ntBASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atp2a1Q8R429 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Atp2a1Q8R429 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms