Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Gm10231-201ENSMUST00000181584 441 ntBASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Gm10175-202ENSMUST00000208752 441 ntBASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nudcd3Q8R1N4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Gm15358-201ENSMUST00000119249 520 ntBASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Gm7506-201ENSMUST00000207758 815 ntBASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nudcd3Q8R1N4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Gm10252-201ENSMUST00000209541 832 ntBASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Gm8655-201ENSMUST00000221159 852 ntBASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Nudcd3Q8R1N4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Nudcd3Q8R1N4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nudcd3Q8R1N4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nudcd3Q8R1N4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms