Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Gm13597-201ENSMUST00000121239 375 ntBASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfwd3Q8CIK8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Gm11779-201ENSMUST00000118541 368 ntBASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Gm37305-201ENSMUST00000195714 4279 ntBASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rfwd3Q8CIK8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 BC037039-201ENSMUST00000192003 2205 ntBASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rfwd3Q8CIK8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Gm12008-201ENSMUST00000117791 755 ntBASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Gm15467-201ENSMUST00000120582 445 ntBASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Gm12260-201ENSMUST00000122447 411 ntBASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Mir8117-201ENSMUST00000184773 107 ntBASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.98□□□□□ -0.17
Rfwd3Q8CIK8 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms