Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc4Q8CG47 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Gm22175-201ENSMUST00000175007 78 ntBASIC18.31■□□□□ 0.52
Smc4Q8CG47 Auts2-212ENSMUST00000178555 309 ntBASIC18.31■□□□□ 0.52
Smc4Q8CG47 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.31■□□□□ 0.52
Smc4Q8CG47 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.31■□□□□ 0.52
Smc4Q8CG47 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Smc4Q8CG47 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc4Q8CG47 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Asic1-205ENSMUST00000228185 1818 ntBASIC18.3■□□□□ 0.52
Smc4Q8CG47 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.3■□□□□ 0.52
Smc4Q8CG47 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 AA543401-201ENSMUST00000164248 1269 ntBASIC18.3■□□□□ 0.52
Smc4Q8CG47 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.3■□□□□ 0.52
Smc4Q8CG47 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.3■□□□□ 0.52
Smc4Q8CG47 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.3■□□□□ 0.52
Smc4Q8CG47 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc4Q8CG47 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Gm18049-201ENSMUST00000208909 581 ntBASIC18.29■□□□□ 0.52
Smc4Q8CG47 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Smc4Q8CG47 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc4Q8CG47 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms