Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim52Q8CDV4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim52Q8CDV4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim52Q8CDV4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim52Q8CDV4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Gm4875-201ENSMUST00000118257 786 ntBASIC18.28■□□□□ 0.52
Trim52Q8CDV4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Gm29667-201ENSMUST00000190817 490 ntBASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Gm44855-201ENSMUST00000205725 362 ntBASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.28■□□□□ 0.52
Trim52Q8CDV4 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim52Q8CDV4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim52Q8CDV4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim52Q8CDV4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim52Q8CDV4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim52Q8CDV4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim52Q8CDV4 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Gm5186-201ENSMUST00000218781 920 ntBASIC18.26■□□□□ 0.51
Trim52Q8CDV4 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Trim52Q8CDV4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Gm3436-201ENSMUST00000179930 840 ntBASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim52Q8CDV4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim52Q8CDV4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms