Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Gm10499-201ENSMUST00000174094 934 ntBASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Gm8655-201ENSMUST00000221159 852 ntBASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd4Q8CC84 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Gm27867-201ENSMUST00000184778 125 ntBASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lysmd4Q8CC84 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Gm27742-201ENSMUST00000184667 60 ntBASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lysmd4Q8CC84 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.34□□□□□ -0.27
Lysmd4Q8CC84 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms