Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptcd1Q8C2E4 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptcd1Q8C2E4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ptcd1Q8C2E4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ptcd1Q8C2E4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptcd1Q8C2E4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptcd1Q8C2E4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptcd1Q8C2E4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Gm27533-201ENSMUST00000183800 152 ntBASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Asic1-205ENSMUST00000228185 1818 ntBASIC18.28■□□□□ 0.52
Ptcd1Q8C2E4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Gm27920-201ENSMUST00000183953 96 ntBASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Gm6218-201ENSMUST00000219812 628 ntBASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ptcd1Q8C2E4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.27■□□□□ 0.51
Ptcd1Q8C2E4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ptcd1Q8C2E4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ptcd1Q8C2E4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ptcd1Q8C2E4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ptcd1Q8C2E4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ptcd1Q8C2E4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms