Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf3Q8C120 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.52■□□□□ 0.07
Sh3rf3Q8C120 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf3Q8C120 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf3Q8C120 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf3Q8C120 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf3Q8C120 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.51■□□□□ 0.07
Sh3rf3Q8C120 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3rf3Q8C120 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Gm1401-201ENSMUST00000122048 772 ntBASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.49■□□□□ 0.07
Sh3rf3Q8C120 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms