Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rd3Q8BRE0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.77■□□□□ 0.11
Rd3Q8BRE0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
Rd3Q8BRE0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rd3Q8BRE0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rd3Q8BRE0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rd3Q8BRE0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Rd3Q8BRE0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Dancr-204ENSMUST00000132389 2347 ntBASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Gm13453-201ENSMUST00000118708 357 ntBASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.76■□□□□ 0.11
Rd3Q8BRE0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rd3Q8BRE0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Gm5866-201ENSMUST00000177881 973 ntBASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Gm27437-201ENSMUST00000183429 107 ntBASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Gm29541-201ENSMUST00000191351 678 ntBASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rd3Q8BRE0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.74■□□□□ 0.11
Rd3Q8BRE0 Mir8102-201ENSMUST00000184148 139 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms