Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Cpsf4Q8BQZ5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Gm14140-201ENSMUST00000119999 995 ntBASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4Q8BQZ5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf4Q8BQZ5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Cpsf4Q8BQZ5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms