Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rab11fip4Q8BQP8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip4Q8BQP8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rab11fip4Q8BQP8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rab11fip4Q8BQP8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip4Q8BQP8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip4Q8BQP8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rab11fip4Q8BQP8 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.48■□□□□ 0.23
Rab11fip4Q8BQP8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rab11fip4Q8BQP8 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rab11fip4Q8BQP8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms