Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdhr3Q8BL00 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.02□□□□□ -0.32
Cdhr3Q8BL00 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Cdhr3Q8BL00 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdhr3Q8BL00 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cdhr3Q8BL00 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.02□□□□□ -0.32
Cdhr3Q8BL00 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdhr3Q8BL00 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdhr3Q8BL00 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Gm11185-201ENSMUST00000117732 1007 ntBASIC13□□□□□ -0.33
Cdhr3Q8BL00 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13□□□□□ -0.33
Cdhr3Q8BL00 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Gm2308-201ENSMUST00000166539 1004 ntBASIC13□□□□□ -0.33
Cdhr3Q8BL00 Gm13830-205ENSMUST00000201195 1155 ntBASIC13□□□□□ -0.33
Cdhr3Q8BL00 AC158538.1-201ENSMUST00000225870 294 ntBASIC13□□□□□ -0.33
Cdhr3Q8BL00 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdhr3Q8BL00 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdhr3Q8BL00 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms