Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2bQ8BJF9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2bQ8BJF9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.27■□□□□ 0.03
Chmp2bQ8BJF9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chmp2bQ8BJF9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Gm11780-201ENSMUST00000136880 516 ntBASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2bQ8BJF9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms