Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm19164-201ENSMUST00000210667 640 ntBASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh20Q8BIZ0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Gm1401-201ENSMUST00000122048 772 ntBASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh20Q8BIZ0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Gm11764-201ENSMUST00000120221 623 ntBASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 AW822252-206ENSMUST00000208904 237 ntBASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdh20Q8BIZ0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Gm15358-201ENSMUST00000119249 520 ntBASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Gm15590-201ENSMUST00000078419 552 ntBASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh20Q8BIZ0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms