Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Gm24589-201ENSMUST00000116692 94 ntBASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf38Q8BI21 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Gm27459-201ENSMUST00000184860 107 ntBASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Gm43347-201ENSMUST00000200226 580 ntBASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf38Q8BI21 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm7153-201ENSMUST00000117092 455 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44357-201ENSMUST00000195897 142 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm19658-201ENSMUST00000196231 138 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44367-201ENSMUST00000196836 138 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44350-201ENSMUST00000197197 138 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44390-201ENSMUST00000197533 144 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44313-201ENSMUST00000198018 138 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44486-201ENSMUST00000198508 138 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44314-201ENSMUST00000199263 138 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44394-201ENSMUST00000199558 138 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44484-201ENSMUST00000199873 138 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44466-201ENSMUST00000200264 138 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm44359-201ENSMUST00000200671 138 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf38Q8BI21 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms