Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Gm27628-201ENSMUST00000184911 107 ntBASIC17.47■□□□□ 0.39
Samm50Q8BGH2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Samm50Q8BGH2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Gm5682-201ENSMUST00000173402 505 ntBASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Gm37153-201ENSMUST00000193637 231 ntBASIC17.46■□□□□ 0.39
Samm50Q8BGH2 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.46■□□□□ 0.39
Samm50Q8BGH2 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.46■□□□□ 0.39
Samm50Q8BGH2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.46■□□□□ 0.39
Samm50Q8BGH2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Samm50Q8BGH2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Samm50Q8BGH2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Samm50Q8BGH2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Samm50Q8BGH2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Gm14722-201ENSMUST00000118943 689 ntBASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Gm11764-201ENSMUST00000120221 623 ntBASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.44■□□□□ 0.38
Samm50Q8BGH2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms