Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vrk1Q80X41 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vrk1Q80X41 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vrk1Q80X41 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vrk1Q80X41 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vrk1Q80X41 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vrk1Q80X41 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vrk1Q80X41 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vrk1Q80X41 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vrk1Q80X41 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.21□□□□□ -0.13
Vrk1Q80X41 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.21□□□□□ -0.13
Vrk1Q80X41 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.21□□□□□ -0.13
Vrk1Q80X41 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.21□□□□□ -0.13
Vrk1Q80X41 Gm15483-201ENSMUST00000120338 456 ntBASIC14.21□□□□□ -0.13
Vrk1Q80X41 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.21□□□□□ -0.13
Vrk1Q80X41 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vrk1Q80X41 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Mir6977-201ENSMUST00000184960 64 ntBASIC14.21□□□□□ -0.13
Vrk1Q80X41 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.21□□□□□ -0.13
Vrk1Q80X41 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.21□□□□□ -0.13
Vrk1Q80X41 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vrk1Q80X41 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Vrk1Q80X41 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vrk1Q80X41 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Vrk1Q80X41 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Vrk1Q80X41 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vrk1Q80X41 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vrk1Q80X41 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.21□□□□□ -0.14
Vrk1Q80X41 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vrk1Q80X41 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Vrk1Q80X41 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Gm27618-201ENSMUST00000183671 60 ntBASIC14.2□□□□□ -0.14
Vrk1Q80X41 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Gm5186-201ENSMUST00000218781 920 ntBASIC14.2□□□□□ -0.14
Vrk1Q80X41 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Vrk1Q80X41 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vrk1Q80X41 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.19□□□□□ -0.14
Vrk1Q80X41 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.19□□□□□ -0.14
Vrk1Q80X41 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk1Q80X41 Gm12428-201ENSMUST00000119844 727 ntBASIC14.19□□□□□ -0.14
Vrk1Q80X41 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms