Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh8Q7TSK3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdh8Q7TSK3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdh8Q7TSK3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh8Q7TSK3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms