Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vma21Q78T54 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.14□□□□□ -0.47
Vma21Q78T54 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Gm10499-201ENSMUST00000174094 934 ntBASIC12.14□□□□□ -0.47
Vma21Q78T54 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.14□□□□□ -0.47
Vma21Q78T54 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Vma21Q78T54 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vma21Q78T54 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.14□□□□□ -0.47
Vma21Q78T54 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.14□□□□□ -0.47
Vma21Q78T54 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vma21Q78T54 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vma21Q78T54 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vma21Q78T54 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vma21Q78T54 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vma21Q78T54 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vma21Q78T54 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vma21Q78T54 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vma21Q78T54 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vma21Q78T54 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Vma21Q78T54 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vma21Q78T54 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.12□□□□□ -0.47
Vma21Q78T54 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.12□□□□□ -0.47
Vma21Q78T54 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.12□□□□□ -0.47
Vma21Q78T54 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.12□□□□□ -0.47
Vma21Q78T54 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vma21Q78T54 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vma21Q78T54 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vma21Q78T54 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms