Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx58Q6Q899 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx58Q6Q899 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx58Q6Q899 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ddx58Q6Q899 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ddx58Q6Q899 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx58Q6Q899 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx58Q6Q899 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Gm13223-201ENSMUST00000118609 747 ntBASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Gm28630-201ENSMUST00000187806 498 ntBASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx58Q6Q899 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ddx58Q6Q899 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Gm25144-201ENSMUST00000179561 110 ntBASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Gm25352-201ENSMUST00000179815 110 ntBASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ddx58Q6Q899 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ddx58Q6Q899 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ddx58Q6Q899 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx58Q6Q899 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx58Q6Q899 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx58Q6Q899 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx58Q6Q899 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx58Q6Q899 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ddx58Q6Q899 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Gm13823-201ENSMUST00000119930 345 ntBASIC18.33■□□□□ 0.52
Ddx58Q6Q899 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ddx58Q6Q899 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.32■□□□□ 0.52
Ddx58Q6Q899 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms